Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-di-gmp phosphodiesterase pdec | EYY09_13380 | Not Available | Negative | 2723205 - 2724791 | 60756.6 |
| hypothetical protein | EYY09_13385 | Not Available | Positive | 2725220 - 2725501 | 10288.0 |
| single-stranded dna-binding protein ssb1 | EYY09_13390 | Not Available | Negative | 2725600 - 2726136 | 18976.1 |
| excinuclease abc subunit uvra | EYY09_13395 | Not Available | Positive | 2726391 - 2729213 | 103876.0 |
| mmcq/yjbr family dna-binding protein | EYY09_13400 | Not Available | Negative | 2729248 - 2729604 | 13546.3 |
| yjbq family protein | EYY09_13405 | Not Available | Negative | 2729608 - 2730024 | 15626.7 |
| acid phosphatase apha | EYY09_13410 | Not Available | Negative | 2730135 - 2730848 | 26076.9 |
| Trna-ser | Not Available | Not Available | Positive | 2731349 - 2731436 | Not Available |
| translation initiation factor if-1 | EYY09_13420 | Not Available | Negative | 2731690 - 2731908 | 8250.1 |
| leucyl/phenylalanyl-trna--protein transferase | EYY09_13425 | Not Available | Negative | 2732193 - 2732897 | 26695.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





