Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetate--coa ligase | EYY09_13330 | Not Available | Positive | 2712350 - 2714308 | 72015.3 |
| duf485 domain-containing protein | EYY09_13335 | Not Available | Positive | 2714518 - 2714832 | 11658.3 |
| cation/acetate symporter actp | EYY09_13340 | Not Available | Positive | 2714829 - 2716478 | 59195.7 |
| lrgb family protein | EYY09_13345 | Not Available | Negative | 2716517 - 2717206 | 24932.5 |
| cida/lrga family protein | EYY09_13350 | Not Available | Negative | 2717199 - 2717609 | 15472.9 |
| lysr family transcriptional regulator | EYY09_13355 | Not Available | Positive | 2717713 - 2718597 | 33106.7 |
| na+/h+ antiporter | EYY09_13360 | Not Available | Negative | 2718633 - 2720282 | 60526.6 |
| ncs2 family permease | EYY09_13365 | Not Available | Negative | 2720433 - 2721782 | 45762.5 |
| redox-sensitive transcriptional activator soxr | EYY09_13370 | Not Available | Negative | 2722329 - 2722793 | 17249.9 |
| superoxide response transcriptional regulator soxs | EYY09_13375 | Not Available | Positive | 2722879 - 2723202 | 12911.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





