Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EYY09_13230 | Not Available | Positive | 2690009 - 2690284 | 10265.2 |
| multidrug efflux transporter periplasmic adaptor subunit mdtn | EYY09_13235 | Not Available | Positive | 2690303 - 2691334 | 36924.3 |
| multidrug efflux transporter permease subunit mdto | EYY09_13240 | Not Available | Positive | 2691334 - 2693385 | 76235.3 |
| multidrug efflux transporter outer membrane subunit mdtp | EYY09_13245 | Not Available | Positive | 2693382 - 2694848 | 53482.3 |
| formate dehydrogenase h subunit alpha, selenocysteine-containing | EYY09_13250 | Not Available | Positive | 2695046 - 2697193 | 79257.1 |
| abc transporter substrate-binding protein | EYY09_13255 | Not Available | Positive | 2697568 - 2699136 | 57079.1 |
| abc transporter permease | EYY09_13260 | Not Available | Positive | 2699236 - 2700285 | 37981.1 |
| abc transporter permease | EYY09_13265 | Not Available | Positive | 2700285 - 2701118 | 30128.9 |
| abc transporter atp-binding protein | EYY09_13270 | Not Available | Positive | 2701111 - 2701947 | 31072.8 |
| abc transporter atp-binding protein | EYY09_13275 | Not Available | Positive | 2701934 - 2702638 | 26419.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





