Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cadc family transcriptional regulator | EYY09_12930 | Not Available | Positive | 2619232 - 2620770 | 57876.2 |
| hypothetical protein | EYY09_12935 | Not Available | Negative | 2620661 - 2620906 | 9376.35 |
| cadaverine/lysine antiporter | EYY09_12940 | Not Available | Positive | 2621136 - 2622470 | 46667.8 |
| lysine decarboxylase cada | EYY09_12945 | Not Available | Positive | 2622550 - 2624697 | 81250.7 |
| dipeptide/tripeptide permease dtpc | EYY09_12950 | Not Available | Positive | 2624756 - 2626213 | 52969.7 |
| lysine--trna ligase | EYY09_12955 | Not Available | Positive | 2626450 - 2627967 | 57858.0 |
| type v toxin-antitoxin system toxin ghot | EYY09_12960 | Not Available | Negative | 2628086 - 2628259 | 6555.44 |
| type v toxin-antitoxin system endoribonuclease antitoxin ghos | EYY09_12965 | Not Available | Negative | 2628287 - 2628583 | 11441.5 |
| n-acetyltransferase | EYY09_12970 | Not Available | Negative | 2628811 - 2629083 | 10469.6 |
| autotransporter outer membrane beta-barrel domain-containing protein | EYY09_12975 | Not Available | Negative | 2629297 - 2633226 | 141488.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





