Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uxu operon transcriptional regulator | EYY09_12020 | Not Available | Negative | 2431069 - 2431842 | 29261.8 |
| fructuronate reductase | EYY09_12025 | Not Available | Negative | 2432057 - 2433517 | 53615.3 |
| mannonate dehydratase | EYY09_12030 | Not Available | Negative | 2433598 - 2434782 | 44778.5 |
| gluconate permease gntp | EYY09_12035 | Not Available | Positive | 2435124 - 2436467 | 47155.0 |
| type 1 fimbriae d-mannose specific adhesin fimh | EYY09_12040 | Not Available | Negative | 2436710 - 2437612 | 31433.1 |
| type 1 fimbriae minor subunit fimg | EYY09_12045 | Not Available | Negative | 2437632 - 2438135 | 17437.4 |
| type 1 fimbriae minor subunit fimf | EYY09_12050 | Not Available | Negative | 2438148 - 2438678 | 18701.3 |
| fimbrial biogenesis outer membrane usher protein | EYY09_12055 | Not Available | Negative | 2438688 - 2441324 | 96578.9 |
| type 1 fimbriae chaperone fimc | EYY09_12060 | Not Available | Negative | 2441390 - 2442115 | 26630.5 |
| type 1 fimbrial protein | EYY09_12065 | Not Available | Negative | 2442152 - 2442691 | 19372.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





