Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine phosphatase | EYY09_11615 | Not Available | Negative | 2345512 - 2346480 | 35089.8 |
| ytjb family periplasmic protein | EYY09_11620 | Not Available | Positive | 2346586 - 2347230 | 24070.2 |
| lipoate--protein ligase lpla | EYY09_11625 | Not Available | Positive | 2347258 - 2348274 | 37931.9 |
| type ii toxin-antitoxin system hipa family toxin yjjj | EYY09_11630 | Not Available | Negative | 2348275 - 2349606 | 49732.4 |
| purine-nucleoside phosphorylase | EYY09_11635 | Not Available | Negative | 2349773 - 2350492 | 25937.4 |
| phosphopentomutase | EYY09_11640 | Not Available | Negative | 2350549 - 2351772 | 44395.4 |
| thymidine phosphorylase | EYY09_11645 | Not Available | Negative | 2351824 - 2353146 | 47155.9 |
| deoxyribose-phosphate aldolase | EYY09_11650 | Not Available | Negative | 2353224 - 2354003 | 27749.3 |
| yjji family glycine radical enzyme | EYY09_11655 | Not Available | Positive | 2354261 - 2355811 | 58033.3 |
| yjjw family glycine radical enzyme activase | EYY09_11660 | Not Available | Positive | 2355783 - 2356646 | 31395.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





