Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein traq | EYY09_10285 | Not Available | Positive | 2074118 - 2074645 | 18120.5 |
| conjugal transfer protein trar | EYY09_10290 | Not Available | Positive | 2074696 - 2075100 | 14104.1 |
| tras protein | EYY09_10295 | Not Available | Positive | 2075164 - 2075352 | 7057.09 |
| conjugal transfer protein trat | EYY09_10300 | Not Available | Positive | 2075336 - 2076136 | 30720.7 |
| atp-binding protein | EYY09_10305 | Not Available | Positive | 2076226 - 2079270 | 114058.0 |
| conjugal transfer protein trav | EYY09_10310 | Not Available | Positive | 2079270 - 2079884 | 23392.2 |
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | EYY09_10320 | Not Available | Negative | 2080945 - 2081580 | 24040.6 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | EYY09_10325 | Not Available | Negative | 2081581 - 2082585 | 37418.9 |
| hydroxyisourate hydrolase | EYY09_10330 | Not Available | Negative | 2082694 - 2083107 | 15509.5 |
| response regulator transcription factor hprr | EYY09_10335 | Not Available | Positive | 2083240 - 2083911 | 24982.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





