Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-threonylcarbamoyladenylate synthase type 1 tsac | EYY09_09835 | Not Available | Negative | 2006323 - 2006895 | 20669.8 |
| hypothetical protein | EYY09_09840 | Not Available | Negative | 2006900 - 2007442 | 19801.9 |
| duf494 domain-containing protein | EYY09_09845 | Not Available | Negative | 2007471 - 2007944 | 18457.1 |
| dna-protecting protein dpra | EYY09_09850 | Not Available | Negative | 2007916 - 2009040 | 40913.2 |
| peptide deformylase | EYY09_09855 | Not Available | Positive | 2009170 - 2009679 | 19329.6 |
| methionyl-trna formyltransferase | EYY09_09860 | Not Available | Positive | 2009694 - 2010641 | 34218.6 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | EYY09_09865 | Not Available | Positive | 2010693 - 2011982 | 48259.1 |
| trk system potassium transporter trka | EYY09_09870 | Not Available | Positive | 2012004 - 2013380 | 50370.8 |
| large-conductance mechanosensitive channel protein mscl | EYY09_09875 | Not Available | Positive | 2013510 - 2013923 | 15072.8 |
| alternative ribosome-rescue factor a | EYY09_09880 | Not Available | Negative | 2013920 - 2014138 | 8229.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





