Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acid resistance gamma-aminobutyrate antiporter gadc | EYY09_08795 | Not Available | Negative | 1807282 - 1808817 | 55094.0 |
| glutamate racemase | EYY09_08800 | Not Available | Negative | 1809416 - 1810273 | 31219.9 |
| tonb-dependent vitamin b12 receptor btub | EYY09_08805 | Not Available | Negative | 1810218 - 1812062 | 68439.8 |
| trna (uridine(54)-c5)-methyltransferase trma | EYY09_08810 | Not Available | Positive | 1812431 - 1813531 | 41885.3 |
| yijd family membrane protein | EYY09_08815 | Not Available | Negative | 1813571 - 1813930 | 13010.3 |
| hth-type transcriptional repressor fabr | EYY09_08820 | Not Available | Negative | 1813930 - 1814580 | 24536.5 |
| mfs transporter | EYY09_08825 | Not Available | Negative | 1814684 - 1816000 | 47097.5 |
| amidohydrolase | EYY09_08830 | Not Available | Negative | 1816043 - 1817209 | 42210.6 |
| si-specific nad(p)(+) transhydrogenase | EYY09_08835 | Not Available | Positive | 1817539 - 1818939 | 51563.4 |
| dna-binding transcriptional regulator oxyr | EYY09_08840 | Not Available | Negative | 1818922 - 1819839 | 34278.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





