Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ni(ii)/co(ii) efflux transporter accessory subunit rcnb | EYY09_07960 | Not Available | Negative | 1628604 - 1628942 | 12466.8 |
| nickel/cobalt efflux protein rcna | EYY09_07965 | Not Available | Negative | 1629161 - 1629985 | 30475.2 |
| ni(ii)/co(ii)-binding transcriptional repressor rcnr | EYY09_07970 | Not Available | Positive | 1630106 - 1630378 | 10134.5 |
| hydroxyethylthiazole kinase | EYY09_07975 | Not Available | Positive | 1630601 - 1631389 | 27328.7 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | EYY09_07980 | Not Available | Positive | 1631386 - 1632186 | 28666.3 |
| glycoside hydrolase family 25 protein | EYY09_07985 | Not Available | Positive | 1632251 - 1633069 | 31777.9 |
| gntr family transcriptional regulator | EYY09_07990 | Not Available | Positive | 1633121 - 1633867 | 28280.8 |
| sugar kinase | EYY09_07995 | Not Available | Negative | 1633841 - 1634806 | 34380.4 |
| adp-ribosylglycohydrolase family protein | EYY09_08000 | Not Available | Negative | 1634803 - 1635807 | 35578.5 |
| mfs transporter | EYY09_08005 | Not Available | Negative | 1635804 - 1637081 | 47349.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





