Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent89 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1269160 bp
Thymine Count
1265808 bp
Guanine Count
1287494 bp
Cytosine Count
1304868 bp
Genome Length
5127438 bp
Protein-coding Genes
4763 genes
Non-Coding Genes
190 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p hydroxylase | EYY09_06895 | Not Available | Positive | 1376637 - 1377185 | 21130.6 |
| yfcl family protein | EYY09_06900 | Not Available | Positive | 1377219 - 1377497 | 10023.6 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | EYY09_06905 | Not Available | Negative | 1377618 - 1379624 | 74383.2 |
| beta-ketoacyl-acp synthase i | EYY09_06910 | Not Available | Positive | 1379783 - 1381003 | 42615.9 |
| arabinose transporter | EYY09_06915 | Not Available | Positive | 1381268 - 1382446 | 40453.7 |
| flagella biosynthesis regulator flk | EYY09_06920 | Not Available | Negative | 1382443 - 1383438 | 36640.4 |
| 4-phosphoerythronate dehydrogenase pdxb | EYY09_06925 | Not Available | Positive | 1383537 - 1384673 | 41273.9 |
| aspartate-semialdehyde dehydrogenase | EYY09_06930 | Not Available | Positive | 1384739 - 1385752 | 36338.1 |
| trna pseudouridine(38-40) synthase trua | EYY09_06935 | Not Available | Positive | 1385752 - 1386564 | 30414.2 |
| deda family protein | EYY09_06940 | Not Available | Positive | 1386647 - 1387306 | 24647.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





