Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate metabolism transcriptional regulator phnf | EYY08_03205 | Not Available | Negative | 616159 - 616884 | 27623.1 |
| phosphonate abc transporter, permease protein phne | EYY08_03210 | Not Available | Negative | 616905 - 617684 | 28399.3 |
| phosphonate abc transporter substrate-binding protein | EYY08_03215 | Not Available | Negative | 617790 - 618806 | 37270.5 |
| phosphonate abc transporter atp-binding protein | EYY08_03220 | Not Available | Negative | 618831 - 619619 | 29437.4 |
| voc family metalloprotein yjdn | EYY08_03225 | Not Available | Negative | 619752 - 620195 | 16138.1 |
| phna family protein | EYY08_03230 | Not Available | Negative | 620355 - 620690 | 12364.7 |
| clamp-binding protein crfc | EYY08_03235 | Not Available | Positive | 621092 - 623320 | 84250.7 |
| hypothetical protein | EYY08_03240 | Not Available | Positive | 623317 - 624195 | 32937.7 |
| proline/glycine betaine transporter prop | EYY08_03245 | Not Available | Positive | 624459 - 625961 | 54849.1 |
| lpxt activity modulator pmrr | EYY08_03250 | Not Available | Positive | 626073 - 626162 | 3495.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





