Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EYY08_03105 | Not Available | Negative | 598710 - 598985 | 10271.2 |
| alkyl sulfatase yjcs | EYY08_03110 | Not Available | Negative | 599193 - 601178 | 73291.1 |
| allose kinase | EYY08_03115 | Not Available | Negative | 601451 - 602380 | 33819.8 |
| ribulose-phosphate 3-epimerase | EYY08_03120 | Not Available | Negative | 602364 - 603059 | 26051.6 |
| d-allose abc transporter permease | EYY08_03125 | Not Available | Negative | 603070 - 604050 | 34313.8 |
| d-allose abc transporter atp-binding protein alsa | EYY08_03130 | Not Available | Negative | 604029 - 605561 | 56768.4 |
| d-allose transporter substrate-binding protein | EYY08_03135 | Not Available | Negative | 605688 - 606623 | 32897.7 |
| als operon dna-binding transcriptional repressor alsr | EYY08_03140 | Not Available | Negative | 606682 - 607572 | 32412.2 |
| bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase rpib | EYY08_03145 | Not Available | Positive | 607931 - 608380 | 16046.2 |
| protein yjdp | EYY08_03150 | Not Available | Positive | 608449 - 608778 | 13469.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





