Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c nitrite reductase subunit nrfd | EYY08_03055 | Not Available | Positive | 585282 - 586238 | 34984.3 |
| heme lyase ccmf/nrfe family subunit | EYY08_03060 | Not Available | Positive | 586318 - 587976 | 61566.5 |
| heme lyase nrfefg subunit nrff | EYY08_03065 | Not Available | Positive | 587969 - 588352 | 14603.0 |
| heme lyase nrfefg subunit nrfg | EYY08_03070 | Not Available | Positive | 588349 - 588945 | 22784.4 |
| glutamate/aspartate:proton symporter gltp | EYY08_03075 | Not Available | Positive | 589287 - 590600 | 47134.0 |
| sel1 repeat family protein | EYY08_03080 | Not Available | Negative | 591018 - 591707 | 25080.4 |
| formate dehydrogenase subunit alpha | EYY08_03085 | Not Available | Negative | 591801 - 593948 | 79258.1 |
| multidrug efflux transporter outer membrane subunit mdtp | EYY08_03090 | Not Available | Negative | 594146 - 595612 | 53440.3 |
| multidrug efflux transporter permease subunit mdto | EYY08_03095 | Not Available | Negative | 595609 - 597660 | 76167.2 |
| multidrug efflux transporter periplasmic adaptor subunit mdtn | EYY08_03100 | Not Available | Negative | 597660 - 598691 | 36938.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





