Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| redox-sensitive transcriptional activator soxr | EYY08_03005 | Not Available | Positive | 573727 - 574191 | 17235.8 |
| ncs2 family permease | EYY08_03010 | Not Available | Positive | 574737 - 576086 | 45778.5 |
| na+/h+ antiporter | EYY08_03015 | Not Available | Positive | 576237 - 577886 | 60527.5 |
| cation/acetate symporter actp | EYY08_03020 | Not Available | Negative | 577969 - 579618 | 59195.7 |
| duf485 domain-containing protein | EYY08_03025 | Not Available | Negative | 579615 - 579929 | 11672.3 |
| acetate--coa ligase | EYY08_03030 | Not Available | Negative | 580220 - 582178 | 72134.5 |
| hypothetical protein | EYY08_03035 | Not Available | Positive | 582452 - 582649 | 7772.32 |
| ammonia-forming nitrite reductase cytochrome c552 subunit | EYY08_03040 | Not Available | Positive | 582570 - 584006 | 53678.6 |
| cytochrome c nitrite reductase pentaheme subunit | EYY08_03045 | Not Available | Positive | 584051 - 584617 | 20715.6 |
| cytochrome c nitrite reductase fe-s protein | EYY08_03050 | Not Available | Positive | 584614 - 585285 | 24554.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





