Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator oxyr | EYY08_02640 | Not Available | Positive | 517596 - 518513 | 34278.0 |
| si-specific nad(p)(+) transhydrogenase | EYY08_02645 | Not Available | Negative | 518496 - 519896 | 51563.4 |
| hth-type transcriptional repressor fabr | EYY08_02650 | Not Available | Positive | 520228 - 520878 | 24536.5 |
| yijd family membrane protein | EYY08_02655 | Not Available | Positive | 520878 - 521237 | 13038.3 |
| trna (uridine(54)-c5)-methyltransferase trma | EYY08_02660 | Not Available | Negative | 521277 - 522377 | 41982.4 |
| tonb-dependent vitamin b12 receptor btub | EYY08_02665 | Not Available | Positive | 522746 - 524590 | 68638.3 |
| glutamate racemase | EYY08_02670 | Not Available | Positive | 524535 - 525392 | 31191.8 |
| host specificity protein j | EYY08_02675 | Not Available | Negative | 525609 - 526474 | 31315.6 |
| omptin family outer membrane protease ompt | EYY08_02680 | Not Available | Negative | 526475 - 527278 | 30076.0 |
| hypothetical protein | EYY08_02690 | Not Available | Positive | 528197 - 528559 | 13107.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





