Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf535 domain-containing protein | EYY08_01760 | Not Available | Negative | 324804 - 325760 | 36951.1 |
| maca family efflux pump subunit | EYY08_01765 | Not Available | Positive | 325911 - 327026 | 40739.5 |
| macrolide abc transporter permease/atp-binding protein macb | EYY08_01770 | Not Available | Positive | 327023 - 328969 | 70650.7 |
| cold shock-like protein cspd | EYY08_01775 | Not Available | Negative | 329042 - 329266 | 7969.41 |
| atp-dependent clp protease adapter clps | EYY08_01780 | Not Available | Positive | 329589 - 329909 | 12179.7 |
| atp-dependent clp protease atp-binding subunit clpa | EYY08_01785 | Not Available | Positive | 329940 - 332216 | 84211.9 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 330005 - 330120 | Not Available |
| hypothetical protein | EYY08_01790 | Not Available | Negative | 332451 - 332675 | 8576.14 |
| Trna-ser | Not Available | Not Available | Positive | 332740 - 332827 | Not Available |
| translation initiation factor if-1 | EYY08_01800 | Not Available | Negative | 333081 - 333299 | 8250.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





