Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna endonuclease smra | EYY08_26325 | Not Available | Negative | 5072558 - 5073121 | 21563.8 |
| dha2 family efflux mfs transporter permease subunit | EYY08_26330 | Not Available | Negative | 5073316 - 5074827 | 55384.6 |
| hlyd family secretion protein | EYY08_26335 | Not Available | Negative | 5074827 - 5075855 | 37846.4 |
| methylated-dna--[protein]-cysteine s-methyltransferase | EYY08_26350 | Not Available | Positive | 5077310 - 5077825 | 19150.2 |
| fumarate/nitrate reduction transcriptional regulator fnr | EYY08_26355 | Not Available | Positive | 5078020 - 5078772 | 27968.9 |
| universal stress protein uspe | EYY08_26360 | Not Available | Positive | 5078924 - 5079874 | 35708.9 |
| duf2534 family protein | EYY08_26365 | Not Available | Negative | 5079924 - 5080181 | 9339.82 |
| low conductance mechanosensitive channel ynai | EYY08_26370 | Not Available | Positive | 5080425 - 5081456 | 38714.7 |
| peptide abc transporter substrate-binding protein | EYY08_26375 | Not Available | Negative | 5081507 - 5083120 | 59908.3 |
| lysr family transcriptional regulator | EYY08_26380 | Not Available | Negative | 5083457 - 5084356 | 33467.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





