Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail fiber assembly protein | EYY08_02895 | Not Available | Positive | 554170 - 554619 | 16851.8 |
| Putative tail fiber assembly protein | EYY08_02900 | Not Available | Negative | 554591 - 555193 | 21762.2 |
| Tail fiber protein | EYY08_02905 | Not Available | Negative | 555193 - 555705 | 17938.4 |
| Dna invertase, resolvase, site-specific recombinase pin | EYY08_02910 | Not Available | Positive | 555704 - 556267 | 21174.5 |
| capsid protein | EYY08_02915 | Not Available | Positive | 556292 - 556414 | 4459.59 |
| Dini-like protein | EYY08_02920 | Not Available | Negative | 556411 - 556659 | 9379.14 |
| Integrase | EYY08_02925 | Not Available | Negative | 556721 - 557818 | 41810.2 |
| trna dihydrouridine(20/20a) synthase dusa | EYY08_02930 | Not Available | Positive | 557907 - 558944 | 38627.3 |
| envelope stress response protein pspg | EYY08_02935 | Not Available | Positive | 559078 - 559320 | 9052.06 |
| quinone oxidoreductase | EYY08_02940 | Not Available | Negative | 559486 - 560469 | 35174.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





