Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yhfx family plp-dependent enzyme | EYY08_25750 | Not Available | Positive | 4974811 - 4975974 | 42307.7 |
| phosphopentomutase | EYY08_25755 | Not Available | Positive | 4975974 - 4977200 | 44700.4 |
| phosphotriesterase-related protein | EYY08_25760 | Not Available | Positive | 4977197 - 4978075 | 32891.4 |
| duf2620 domain-containing protein | EYY08_25765 | Not Available | Positive | 4978086 - 4978439 | 12479.5 |
| hypothetical protein | EYY08_25770 | Not Available | Positive | 4978451 - 4979755 | 46507.3 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EYY08_25775 | Not Available | Positive | 4979767 - 4980852 | 38630.9 |
| duf4223 domain-containing protein | EYY08_25780 | Not Available | Negative | 4980960 - 4981127 | 5819.16 |
| uroporphyrinogen-iii c-methyltransferase | EYY08_25785 | Not Available | Negative | 4981379 - 4982752 | 49980.4 |
| nitrite transporter nirc | EYY08_25790 | Not Available | Negative | 4982771 - 4983577 | 28565.2 |
| nitrite reductase small subunit nird | EYY08_25795 | Not Available | Negative | 4983703 - 4984029 | 12270.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





