Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2170 family protein | EYY08_00395 | Not Available | Positive | 64141 - 64542 | 14955.9 |
| pspa/im30 family protein | EYY08_00400 | Not Available | Positive | 64561 - 65259 | 25335.0 |
| duf2491 family protein | EYY08_00405 | Not Available | Positive | 65309 - 65968 | 25029.4 |
| duf350 domain-containing protein | EYY08_00410 | Not Available | Positive | 65986 - 66384 | 14242.7 |
| duf1190 domain-containing protein | EYY08_00415 | Not Available | Positive | 66394 - 67032 | 23421.1 |
| glutathionylspermidine synthase family protein | EYY08_00420 | Not Available | Positive | 67035 - 68198 | 45008.9 |
| Ncrna_class:other | Not Available | Not Available | Positive | 67294 - 67477 | Not Available |
| isovaleryl-coa dehydrogenase | EYY08_00425 | Not Available | Positive | 68282 - 69907 | 60638.5 |
| protease activator yjfn | EYY08_00430 | Not Available | Negative | 70015 - 70290 | 9983.65 |
| biofilm peroxide resistance protein bsma | EYY08_00435 | Not Available | Negative | 70439 - 70768 | 12066.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





