Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | EYY08_25195 | Not Available | Positive | 4853396 - 4854463 | 38774.4 |
| ribosome-associated atpase | EYY08_25200 | Not Available | Positive | 4854460 - 4857195 | 100703.0 |
| abc-2 transporter permease | EYY08_25205 | Not Available | Positive | 4857195 - 4858319 | 41020.1 |
| type ii toxin-antitoxin system hica family toxin | EYY08_25210 | Not Available | Positive | 4858392 - 4858667 | 10186.4 |
| type ii toxin-antitoxin system hicb family antitoxin | EYY08_25215 | Not Available | Positive | 4858664 - 4859023 | 13390.0 |
| nickel-responsive transcriptional regulator nikr | EYY08_25220 | Not Available | Negative | 4859143 - 4859544 | 15094.7 |
| nickel import atp-binding protein nike | EYY08_25225 | Not Available | Negative | 4859550 - 4860356 | 29695.5 |
| nickel import atp-binding protein nikd | EYY08_25230 | Not Available | Negative | 4860353 - 4861117 | 26812.2 |
| nickel abc transporter permease subunit nikc | EYY08_25235 | Not Available | Negative | 4861117 - 4861950 | 30363.8 |
| nickel abc transporter permease subunit nikb | EYY08_25240 | Not Available | Negative | 4861947 - 4862891 | 35231.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





