Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid-partitioning protein sopa | EYY08_24935 | Not Available | Positive | 4799116 - 4800282 | 43690.6 |
| parb/repb/spo0j family plasmid partition protein | EYY08_24940 | Not Available | Positive | 4800282 - 4801253 | 35388.3 |
| short-chain fatty acid transporter | EYY08_24950 | Not Available | Positive | 4801662 - 4804513 | 95592.3 |
| host specificity protein j | EYY08_24955 | Not Available | Positive | 4804514 - 4806904 | 86241.5 |
| ail/lom family protein | EYY08_24960 | Not Available | Positive | 4806975 - 4807187 | 7512.84 |
| omptin family outer membrane protease | EYY08_24965 | Not Available | Positive | 4807188 - 4807448 | 9817.22 |
| alpha/beta hydrolase | EYY08_24970 | Not Available | Positive | 4807633 - 4809117 | 55008.2 |
| tail fiber assembly protein | EYY08_24975 | Not Available | Negative | 4809300 - 4809605 | 11638.0 |
| methyltransferase | EYY08_24980 | Not Available | Positive | 4809662 - 4809782 | 4626.75 |
| phage tail protein | EYY08_24985 | Not Available | Positive | 4809783 - 4810486 | 25272.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





