Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphogluconate phosphatase | EYY08_23975 | Not Available | Negative | 4600556 - 4601221 | 24783.8 |
| ncs2 family permease | EYY08_23980 | Not Available | Positive | 4601388 - 4602725 | 46815.7 |
| nad(p)h-dependent chromate oxidoreductase yief | EYY08_23985 | Not Available | Negative | 4602779 - 4603345 | 20376.8 |
| hypothetical protein | EYY08_23990 | Not Available | Negative | 4603367 - 4604116 | 27648.2 |
| hth-type transcriptional regulator yidz | EYY08_23995 | Not Available | Negative | 4604273 - 4605232 | 36919.9 |
| multidrug efflux mfs transporter mdtl | EYY08_24000 | Not Available | Negative | 4605207 - 4606382 | 41608.4 |
| low affinity tryptophan permease tnab | EYY08_24005 | Not Available | Negative | 4606641 - 4607888 | 45257.3 |
| tryptophanase | EYY08_24010 | Not Available | Negative | 4607980 - 4609395 | 52776.4 |
| tryptophanase leader peptide | EYY08_24015 | Not Available | Negative | 4609616 - 4609690 | 2894.56 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | EYY08_24020 | Not Available | Negative | 4609932 - 4611296 | 49233.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





