Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose abc transporter substrate-binding protein rbsb | EYY08_23775 | Not Available | Negative | 4556311 - 4557201 | 30940.2 |
| ribose abc transporter permease | EYY08_23780 | Not Available | Negative | 4557226 - 4558191 | 33454.0 |
| ribose abc transporter atp-binding protein rbsa | EYY08_23785 | Not Available | Negative | 4558196 - 4559701 | 55031.0 |
| d-ribose pyranase | EYY08_23790 | Not Available | Negative | 4559709 - 4560128 | 15293.4 |
| low affinity potassium transporter kup | EYY08_23795 | Not Available | Negative | 4560295 - 4562163 | 69326.4 |
| atpase rava | EYY08_23800 | Not Available | Positive | 4562386 - 4563882 | 56405.1 |
| atpase rava stimulator viaa | EYY08_23805 | Not Available | Positive | 4563876 - 4565327 | 55910.6 |
| aspartate--ammonia ligase | EYY08_23810 | Not Available | Negative | 4565332 - 4566324 | 36652.6 |
| transcriptional regulator asnc | EYY08_23815 | Not Available | Positive | 4566476 - 4566934 | 16888.7 |
| fmn-binding protein mioc | EYY08_23820 | Not Available | Positive | 4567024 - 4567467 | 15812.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





