Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | EYY08_23670 | Not Available | Negative | 4540102 - 4540329 | 8418.91 |
| helix-turn-helix domain-containing protein | EYY08_23675 | Not Available | Positive | 4540407 - 4540814 | 15366.2 |
| duf1391 domain-containing protein | EYY08_23680 | Not Available | Positive | 4541007 - 4541159 | 5519.42 |
| hypothetical protein | EYY08_23685 | Not Available | Positive | 4541171 - 4541536 | 13230.9 |
| hypothetical protein | EYY08_23690 | Not Available | Negative | 4541505 - 4541792 | 11122.5 |
| hypothetical protein | EYY08_23695 | Not Available | Positive | 4542046 - 4542262 | 7150.26 |
| tail fiber assembly protein | EYY08_23700 | Not Available | Positive | 4542262 - 4542837 | 21297.8 |
| parb/repb/spo0j family plasmid partition protein | EYY08_23705 | Not Available | Negative | 4542870 - 4543835 | 35842.9 |
| plasmid-partitioning protein sopa | EYY08_23710 | Not Available | Negative | 4543835 - 4545001 | 43632.4 |
| type i restriction endonuclease | EYY08_23715 | Not Available | Negative | 4545500 - 4546819 | 50463.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





