Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| orf6n domain-containing protein | EYY08_22140 | Not Available | Positive | 4260772 - 4261335 | 21720.2 |
| hypothetical protein | EYY08_22145 | Not Available | Negative | 4261255 - 4261440 | 6733.29 |
| hypothetical protein | EYY08_22150 | Not Available | Positive | 4261569 - 4262138 | 21633.4 |
| hypothetical protein | EYY08_22155 | Not Available | Negative | 4262107 - 4262322 | 8007.65 |
| phage holin, lambda family | EYY08_22160 | Not Available | Positive | 4262486 - 4262827 | 12035.0 |
| lysozyme | EYY08_22165 | Not Available | Positive | 4262831 - 4262967 | 5207.0 |
| is200/is605 family transposase | EYY08_22170 | Not Available | Positive | 4262968 - 4263057 | 3364.96 |
| mfs transporter | EYY08_22175 | Not Available | Negative | 4263165 - 4264538 | 48138.7 |
| dna-binding transcriptional regulator kdgr | EYY08_22180 | Not Available | Positive | 4264715 - 4265506 | 30031.1 |
| hypothetical protein | EYY08_22185 | Not Available | Negative | 4265650 - 4265889 | 8514.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





