Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 4209613 - 4209689 | Not Available |
| nucleocapsid protein | EYY08_21805 | Not Available | Positive | 4210655 - 4210780 | 4796.21 |
| sam-dependent methyltransferase | EYY08_21810 | Not Available | Negative | 4210737 - 4210977 | 8546.14 |
| is1 family transposase | EYY08_21815 | Not Available | Positive | 4210978 - 4211073 | 3625.4 |
| restriction endonuclease | EYY08_21825 | Not Available | Negative | 4211504 - 4214140 | 101308.0 |
| site-specific dna-methyltransferase | EYY08_21830 | Not Available | Negative | 4214145 - 4216079 | 74082.8 |
| is1 family transposase | EYY08_21835 | Not Available | Positive | 4216200 - 4216831 | 24197.4 |
| duf1367 family protein | EYY08_21840 | Not Available | Negative | 4216832 - 4216992 | 6368.82 |
| s8 family peptidase | EYY08_21845 | Not Available | Negative | 4217409 - 4219673 | 82194.7 |
| aaa family atpase | EYY08_21850 | Not Available | Negative | 4219648 - 4220802 | 43091.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





