Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2877 domain-containing protein | EYY08_21740 | Not Available | Positive | 4200891 - 4201706 | 29698.0 |
| carbamate kinase | EYY08_21745 | Not Available | Positive | 4201703 - 4202596 | 31674.1 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | EYY08_21750 | Not Available | Negative | 4203129 - 4204196 | 39512.4 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | EYY08_21755 | Not Available | Negative | 4204193 - 4204702 | 17781.3 |
| udp-2,3-diacylglucosamine diphosphatase | EYY08_21760 | Not Available | Negative | 4204819 - 4205541 | 26867.6 |
| peptidylprolyl isomerase b | EYY08_21765 | Not Available | Negative | 4205544 - 4206038 | 18168.5 |
| cysteine--trna ligase | EYY08_21770 | Not Available | Positive | 4206212 - 4207597 | 52186.9 |
| metal-dependent hydrolase | EYY08_21775 | Not Available | Negative | 4207633 - 4208154 | 19511.6 |
| ribosome-associated protein ybcj | EYY08_21780 | Not Available | Negative | 4208262 - 4208474 | 7389.95 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | EYY08_21785 | Not Available | Negative | 4208476 - 4209342 | 30987.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





