Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nlpc/p60 family protein | EYY08_00035 | Not Available | Positive | 2146 - 2496 | 13363.6 |
| tail assembly protein | EYY08_00040 | Not Available | Positive | 2433 - 3041 | 21386.8 |
| host specificity protein j | EYY08_00045 | Not Available | Positive | 3102 - 4283 | 43918.8 |
| transposase family protein | EYY08_00050 | Not Available | Negative | 4284 - 4512 | 8770.48 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4993 - 5108 | Not Available |
| hypothetical protein | EYY08_00060 | Not Available | Negative | 5192 - 5518 | 12747.0 |
| rhs repeat-associated core domain-containing protein | EYY08_00065 | Not Available | Negative | 5520 - 6137 | 23377.5 |
| exonuclease viii | EYY08_00070 | Not Available | Positive | 6176 - 7951 | 64998.4 |
| host specificity protein j | EYY08_00075 | Not Available | Negative | 7952 - 8978 | 37984.8 |
| endopeptidase | EYY08_00090 | Not Available | Negative | 9584 - 9746 | 6263.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





