Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-sulfur cluster-binding protein | EYY08_20670 | Not Available | Positive | 3966628 - 3968055 | 52985.8 |
| lactate utilization protein c | EYY08_20675 | Not Available | Positive | 3968048 - 3968743 | 25125.1 |
| hypothetical protein | EYY08_20680 | Not Available | Negative | 3968984 - 3969652 | 25395.0 |
| autotransporter outer membrane beta-barrel domain-containing protein | EYY08_20685 | Not Available | Negative | 3969834 - 3971027 | 41852.4 |
| hypothetical protein | EYY08_20695 | Not Available | Negative | 3972167 - 3972928 | 28292.4 |
| helix-turn-helix transcriptional regulator | EYY08_20700 | Not Available | Negative | 3973082 - 3973876 | 29534.2 |
| dna recombinase | EYY08_20705 | Not Available | Negative | 3973935 - 3974498 | 21831.7 |
| choline dehydrogenase | EYY08_20710 | Not Available | Negative | 3975661 - 3977349 | 62708.2 |
| betaine-aldehyde dehydrogenase | EYY08_20715 | Not Available | Negative | 3977363 - 3978835 | 53011.3 |
| transcriptional regulator beti | EYY08_20720 | Not Available | Negative | 3978849 - 3979436 | 21750.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





