Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysozyme | EYY08_20445 | Not Available | Positive | 3925631 - 3926164 | 19676.6 |
| duf2514 domain-containing protein | EYY08_20450 | Not Available | Positive | 3926161 - 3926658 | 18263.8 |
| cold shock protein cspi | EYY08_20455 | Not Available | Positive | 3927022 - 3927234 | 7684.14 |
| cold-shock protein | EYY08_20460 | Not Available | Positive | 3927245 - 3927433 | 7203.67 |
| hypothetical protein | EYY08_20465 | Not Available | Positive | 3927581 - 3927736 | 5657.77 |
| addiction module toxin, gnsa/gnsb family | EYY08_20470 | Not Available | Positive | 3927909 - 3928082 | 6608.09 |
| hypothetical protein | EYY08_20475 | Not Available | Positive | 3928378 - 3928584 | 7680.15 |
| duf1441 family protein | EYY08_20485 | Not Available | Positive | 3929135 - 3929674 | 20128.0 |
| phage terminase large subunit family protein | EYY08_20490 | Not Available | Positive | 3929683 - 3931266 | 59912.8 |
| is1 family transposase | EYY08_20495 | Not Available | Positive | 3931267 - 3931374 | 4186.09 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





