Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit epsilon | EYY08_20175 | Not Available | Positive | 3893538 - 3894269 | 27130.5 |
| Trna-asp | Not Available | Not Available | Positive | 3894402 - 3894478 | Not Available |
| duf957 domain-containing protein | EYY08_20190 | Not Available | Negative | 3895538 - 3895732 | 7243.39 |
| is66 family insertion sequence element accessory protein tnpb | EYY08_20200 | Not Available | Positive | 3896062 - 3896412 | 13249.2 |
| sigma-54-dependent fis family transcriptional regulator | EYY08_20205 | Not Available | Positive | 3896503 - 3897012 | 19498.9 |
| hypothetical protein | EYY08_20210 | Not Available | Positive | 3897141 - 3897632 | 18444.3 |
| dna-binding protein | EYY08_20215 | Not Available | Positive | 3897721 - 3898359 | 24841.9 |
| type i restriction-modification system subunit m | EYY08_20220 | Not Available | Positive | 3898696 - 3900315 | 60723.1 |
| restriction endonuclease subunit s | EYY08_20225 | Not Available | Positive | 3900305 - 3901609 | 48380.7 |
| type i restriction endonuclease subunit r | EYY08_20230 | Not Available | Positive | 3901704 - 3904577 | 109822.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





