Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific dna recombinase | EYY08_18610 | Not Available | Negative | 3581454 - 3582008 | 20558.1 |
| tail fiber protein | EYY08_18615 | Not Available | Positive | 3582038 - 3582184 | 5125.21 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | EYY08_18620 | Not Available | Negative | 3582474 - 3583046 | 21125.2 |
| methionine abc transporter atp-binding protein metn | EYY08_18625 | Not Available | Positive | 3583234 - 3584265 | 37864.7 |
| methionine abc transporter permease meti | EYY08_18630 | Not Available | Positive | 3584258 - 3584911 | 23287.7 |
| methionine abc transporter substrate-binding lipoprotein metq | EYY08_18635 | Not Available | Positive | 3584951 - 3585766 | 29433.3 |
| rcs stress response system protein rcsf | EYY08_18640 | Not Available | Positive | 3585884 - 3586288 | 14164.3 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | EYY08_18645 | Not Available | Positive | 3586285 - 3586992 | 26378.9 |
| proline--trna ligase | EYY08_18650 | Not Available | Positive | 3587103 - 3588821 | 63606.2 |
| yaef family permuted papain-like enzyme | EYY08_18655 | Not Available | Positive | 3588874 - 3589698 | 30003.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





