Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EYY08_18445 | Not Available | Positive | 3557036 - 3557611 | 21676.6 |
| hypothetical protein | EYY08_18450 | Not Available | Positive | 3557624 - 3557836 | 7988.53 |
| is110-like element isec32 family transposase | EYY08_18455 | Not Available | Negative | 3558097 - 3559068 | 35798.9 |
| antirestriction protein | EYY08_18465 | Not Available | Positive | 3559593 - 3559895 | 11513.6 |
| duf1380 domain-containing protein | EYY08_18470 | Not Available | Positive | 3559895 - 3560356 | 17043.3 |
| hypothetical protein | EYY08_18475 | Not Available | Positive | 3560356 - 3560538 | 6870.28 |
| transporter | EYY08_18485 | Not Available | Positive | 3560694 - 3560813 | 4828.18 |
| hypothetical protein | EYY08_18490 | Not Available | Negative | 3561012 - 3561269 | 9854.0 |
| hypothetical protein | EYY08_18495 | Not Available | Positive | 3561532 - 3561762 | 8582.57 |
| duf3560 domain-containing protein | EYY08_18500 | Not Available | Positive | 3561814 - 3563175 | 51717.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





