Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydbh family protein | EYY08_18335 | Not Available | Positive | 3537080 - 3539719 | 96772.0 |
| ynbe family lipoprotein | EYY08_18340 | Not Available | Positive | 3539716 - 3539901 | 6840.53 |
| duf1318 domain-containing protein | EYY08_18345 | Not Available | Positive | 3539909 - 3540235 | 11994.5 |
| helix-turn-helix domain-containing protein | EYY08_18350 | Not Available | Negative | 3540407 - 3540619 | 8199.78 |
| phenylacetic acid degradation protein paax | EYY08_18355 | Not Available | Positive | 3540584 - 3540766 | 6714.07 |
| phenylacetic acid degradation protein paay | EYY08_18360 | Not Available | Positive | 3540748 - 3541338 | 21445.9 |
| pyridoxine 4-dehydrogenase | EYY08_18365 | Not Available | Positive | 3541569 - 3542429 | 30670.8 |
| nadp-dependent isocitrate dehydrogenase | EYY08_18370 | Not Available | Negative | 3542735 - 3543985 | 45772.4 |
| 23s rrna pseudouridine(2457) synthase rlue | EYY08_18375 | Not Available | Positive | 3544157 - 3544810 | 24881.8 |
| phosphatase nudj | EYY08_18380 | Not Available | Positive | 3544820 - 3545281 | 17433.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





