Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpa family transcriptional regulator | EYY08_17975 | Not Available | Positive | 3468796 - 3469002 | 7817.56 |
| hypothetical protein | EYY08_17980 | Not Available | Positive | 3469096 - 3469698 | 23419.2 |
| hypothetical protein | EYY08_17985 | Not Available | Negative | 3469601 - 3469801 | 7344.56 |
| hypothetical protein | EYY08_17990 | Not Available | Negative | 3469859 - 3470161 | 10976.3 |
| hypothetical protein | EYY08_18000 | Not Available | Negative | 3470538 - 3470723 | 6476.97 |
| hypothetical protein | EYY08_18005 | Not Available | Positive | 3470838 - 3471098 | 10144.2 |
| hypothetical protein | EYY08_18015 | Not Available | Negative | 3472231 - 3472488 | 9596.5 |
| abc transporter atp-binding protein | EYY08_18020 | Not Available | Negative | 3472542 - 3473321 | 28026.4 |
| iron abc transporter permease | EYY08_18025 | Not Available | Negative | 3473318 - 3474376 | 37564.4 |
| abc transporter substrate-binding protein | EYY08_18030 | Not Available | Negative | 3474395 - 3475384 | 36749.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





