Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1656 domain-containing protein | EYY08_17590 | Not Available | Negative | 3394990 - 3395193 | 7847.01 |
| hth-type transcriptional activator aaer | EYY08_17595 | Not Available | Positive | 3395376 - 3396305 | 34518.1 |
| metalloprotease tldd | EYY08_17600 | Not Available | Negative | 3396433 - 3397878 | 51367.2 |
| asma2 domain-containing protein | EYY08_17605 | Not Available | Negative | 3398034 - 3401834 | 138940.0 |
| ribonuclease g | EYY08_17610 | Not Available | Negative | 3401902 - 3403371 | 55367.4 |
| nucleoside triphosphate pyrophosphatase yhde | EYY08_17615 | Not Available | Negative | 3403361 - 3403954 | 21430.6 |
| rod shape-determining protein mred | EYY08_17620 | Not Available | Negative | 3403963 - 3404451 | 18788.9 |
| rod shape-determining protein mrec | EYY08_17625 | Not Available | Negative | 3404451 - 3405554 | 39590.9 |
| rod shape-determining protein | EYY08_17630 | Not Available | Negative | 3405620 - 3406663 | 36954.7 |
| rnase e specificity factor csrd | EYY08_17635 | Not Available | Negative | 3406968 - 3408908 | 73432.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





