Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rok family protein | EYY08_17490 | Not Available | Negative | 3375329 - 3376204 | 29591.5 |
| n-acetylmannosamine-6-phosphate 2-epimerase | EYY08_17495 | Not Available | Negative | 3376201 - 3376890 | 24075.0 |
| sialic acid transporter nant | EYY08_17500 | Not Available | Negative | 3376938 - 3378428 | 53640.5 |
| n-acetylneuraminate lyase | EYY08_17505 | Not Available | Negative | 3378538 - 3379431 | 32595.4 |
| transcriptional regulator nanr | EYY08_17510 | Not Available | Negative | 3379553 - 3380344 | 29496.0 |
| anaerobic c4-dicarboxylate transporter dcuc | EYY08_17515 | Not Available | Positive | 3380724 - 3382091 | 48799.9 |
| clpxp protease specificity-enhancing factor | EYY08_17520 | Not Available | Negative | 3382135 - 3382632 | 18233.4 |
| stringent starvation protein a | EYY08_17525 | Not Available | Negative | 3382638 - 3383276 | 24306.3 |
| 30s ribosomal protein s9 | EYY08_17530 | Not Available | Negative | 3383671 - 3384063 | 14857.1 |
| 50s ribosomal protein l13 | EYY08_17535 | Not Available | Negative | 3384079 - 3384507 | 16019.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





