Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein activator | EYY08_17140 | Not Available | Positive | 3306436 - 3308472 | 72801.2 |
| yran family protein | EYY08_17145 | Not Available | Positive | 3308430 - 3308825 | 14824.6 |
| dnaa initiator-associating protein diaa | EYY08_17150 | Not Available | Positive | 3308845 - 3309435 | 21091.4 |
| divisome-associated lipoprotein yrap | EYY08_17155 | Not Available | Positive | 3309445 - 3310020 | 20029.1 |
| permease | EYY08_17160 | Not Available | Negative | 3310133 - 3311173 | 37223.9 |
| nad-dependent epimerase/dehydratase family protein | EYY08_17165 | Not Available | Negative | 3311246 - 3311881 | 23197.3 |
| protein/nucleic acid deglycase | EYY08_17170 | Not Available | Positive | 3312009 - 3312527 | 18829.4 |
| hypothetical protein | EYY08_17175 | Not Available | Negative | 3312507 - 3312950 | 16764.2 |
| dna damage response exodeoxyribonuclease yhbq | EYY08_17180 | Not Available | Positive | 3313001 - 3313303 | 11242.5 |
| n-acetyltransferase | EYY08_17185 | Not Available | Negative | 3313290 - 3313793 | 18534.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





