Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine transporter sstt | EYY08_16885 | Not Available | Positive | 3258113 - 3259357 | 43494.4 |
| ygjv family protein | EYY08_16890 | Not Available | Negative | 3259362 - 3259916 | 20667.8 |
| altronate dehydratase | EYY08_16895 | Not Available | Negative | 3259999 - 3261486 | 54112.2 |
| glucuronate isomerase | EYY08_16900 | Not Available | Negative | 3261501 - 3262913 | 53990.1 |
| mfs transporter | EYY08_16905 | Not Available | Positive | 3263396 - 3264694 | 46909.0 |
| transcriptional regulator exur | EYY08_16910 | Not Available | Positive | 3264824 - 3265600 | 29851.3 |
| deda family protein | EYY08_16915 | Not Available | Positive | 3265945 - 3266607 | 24587.0 |
| envz/ompr regulon moderator mzra | EYY08_16920 | Not Available | Positive | 3266611 - 3266994 | 14173.0 |
| duf1090 domain-containing protein | EYY08_16925 | Not Available | Positive | 3267141 - 3267509 | 13906.4 |
| duf883 domain-containing protein | EYY08_16930 | Not Available | Positive | 3267547 - 3267852 | 11052.1 |
Pathways
351 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





