Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | EYY08_16830 | Not Available | Positive | 3244718 - 3246151 | 52175.7 |
| protein ygjj | EYY08_16835 | Not Available | Positive | 3246285 - 3247355 | 40137.6 |
| alpha-glucosidase | EYY08_16840 | Not Available | Positive | 3247372 - 3249723 | 88320.8 |
| nadph-dependent 2,4-dienoyl-coa reductase | EYY08_16845 | Not Available | Positive | 3249949 - 3251967 | 72698.7 |
| type ii toxin-antitoxin system antitoxin higa | EYY08_16850 | Not Available | Negative | 3252012 - 3252428 | 14996.3 |
| 23s rrna (guanine(1835)-n(2))-methyltransferase rlmg | EYY08_16860 | Not Available | Negative | 3252699 - 3253835 | 42312.8 |
| m48 family metallopeptidase | EYY08_16865 | Not Available | Positive | 3253920 - 3254423 | 19443.6 |
| vancomycin high temperature exclusion protein | EYY08_16870 | Not Available | Positive | 3254500 - 3255183 | 25185.9 |
| gfo/idh/moca family oxidoreductase | EYY08_16875 | Not Available | Positive | 3255262 - 3256248 | 36347.4 |
| terc family membrane protein alx | EYY08_16880 | Not Available | Positive | 3256532 - 3257497 | 35983.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





