Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| g/u mismatch-specific dna glycosylase | EYY08_16780 | Not Available | Negative | 3233501 - 3234007 | 18674.5 |
| Trna-met | Not Available | Not Available | Positive | 3234132 - 3234207 | Not Available |
| nadph-dependent ferric chelate reductase | EYY08_16790 | Not Available | Negative | 3234261 - 3235025 | 28873.1 |
| padr family transcriptional regulator | EYY08_16795 | Not Available | Positive | 3235314 - 3235937 | 23416.7 |
| pas domain s-box protein | EYY08_16800 | Not Available | Negative | 3236041 - 3237561 | 55033.0 |
| putrescine aminotransferase | EYY08_16805 | Not Available | Positive | 3237868 - 3239358 | 53795.3 |
| pp_03288 | EYY08_16810 | Not Available | Negative | 3239400 - 3239732 | Not Available |
| transcriptional regulator ebgr | EYY08_16815 | Not Available | Positive | 3239951 - 3240934 | 36305.7 |
| beta-galactosidase subunit alpha | EYY08_16820 | Not Available | Positive | 3241117 - 3244209 | 117804.0 |
| beta-galactosidase subunit beta | EYY08_16825 | Not Available | Positive | 3244206 - 3244655 | 17457.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





