Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sis domain-containing protein | EYY08_16580 | Not Available | Positive | 3190482 - 3191480 | 36976.4 |
| carbohydrate kinase family protein | EYY08_16585 | Not Available | Positive | 3191485 - 3192399 | 32961.6 |
| esterase-like activity of phytase family protein | EYY08_16590 | Not Available | Positive | 3192427 - 3193551 | 41401.8 |
| porin | EYY08_16595 | Not Available | Positive | 3193686 - 3194381 | 27499.8 |
| duf2608 domain-containing protein | EYY08_16600 | Not Available | Positive | 3194395 - 3195264 | 32975.9 |
| dna topoisomerase iv subunit b | EYY08_16605 | Not Available | Negative | 3195309 - 3197201 | 70247.9 |
| esterase yqia | EYY08_16610 | Not Available | Negative | 3197230 - 3197811 | 21642.7 |
| 3',5'-cyclic-amp phosphodiesterase | EYY08_16615 | Not Available | Negative | 3197811 - 3198638 | 30939.7 |
| duf1249 family protein | EYY08_16620 | Not Available | Negative | 3198663 - 3199085 | 16549.0 |
| adp-ribose pyrophosphatase | EYY08_16625 | Not Available | Negative | 3199086 - 3199715 | 23668.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





