Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase-2 assembly chaperone | EYY08_16375 | Not Available | Negative | 3148272 - 3148760 | 17964.7 |
| hyad/hybd family hydrogenase maturation endopeptidase | EYY08_16380 | Not Available | Negative | 3148753 - 3149247 | 17751.8 |
| hydrogenase 2 large subunit | EYY08_16385 | Not Available | Negative | 3149247 - 3150950 | 62494.6 |
| ni/fe-hydrogenase cytochrome b subunit | EYY08_16390 | Not Available | Negative | 3150947 - 3152125 | 43576.6 |
| hydrogenase 2 operon protein hyba | EYY08_16395 | Not Available | Negative | 3152115 - 3153101 | 36014.0 |
| hydrogenase 2 small subunit | EYY08_16400 | Not Available | Negative | 3153104 - 3154222 | 39654.3 |
| duf2623 domain-containing protein | EYY08_16405 | Not Available | Negative | 3154411 - 3154698 | 10962.1 |
| dienelactone hydrolase family protein | EYY08_16410 | Not Available | Negative | 3154817 - 3155704 | 32561.5 |
| l-glyceraldehyde 3-phosphate reductase | EYY08_16415 | Not Available | Positive | 3155861 - 3156901 | 38867.4 |
| tigr00645 family protein | EYY08_16420 | Not Available | Negative | 3156941 - 3157435 | 18642.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





