Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4942 domain-containing protein | EYY08_16170 | Not Available | Positive | 3102548 - 3103117 | 21771.9 |
| type ii secretion system protein | EYY08_16175 | Not Available | Negative | 3103397 - 3103933 | 20306.6 |
| type ii secretion system protein gspl | EYY08_16180 | Not Available | Negative | 3103935 - 3105113 | 44213.4 |
| general secretion pathway protein gspk | EYY08_16185 | Not Available | Negative | 3105110 - 3106087 | 36544.3 |
| type ii secretion system protein gspj | EYY08_16190 | Not Available | Negative | 3106084 - 3106689 | 22369.4 |
| type ii secretion system protein gspi | EYY08_16195 | Not Available | Negative | 3106686 - 3107057 | 13622.4 |
| type ii secretion system protein gsph | EYY08_16200 | Not Available | Negative | 3107054 - 3107617 | 21192.8 |
| type ii secretion system protein gspg | EYY08_16205 | Not Available | Negative | 3107621 - 3108076 | 16663.8 |
| type ii secretion system protein gspf | EYY08_16210 | Not Available | Negative | 3108093 - 3109316 | 44956.8 |
| type ii secretion system protein gspe | EYY08_16215 | Not Available | Negative | 3109316 - 3110809 | 55181.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





