Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EYY08_15805 | Not Available | Negative | 3054922 - 3055146 | 8506.17 |
| is3 family transposase | EYY08_15810 | Not Available | Negative | 3055731 - 3056276 | 20254.0 |
| duf945 domain-containing protein | EYY08_16130 | Not Available | Positive | 3098830 - 3099409 | 21713.2 |
| antirestriction protein | EYY08_16135 | Not Available | Positive | 3099501 - 3099986 | 18169.3 |
| dna repair protein radc | EYY08_16140 | Not Available | Positive | 3100002 - 3100478 | 17658.4 |
| duf987 domain-containing protein | EYY08_16145 | Not Available | Positive | 3100541 - 3100762 | 8411.2 |
| type iv toxin-antitoxin system toxin cbta | EYY08_16150 | Not Available | Positive | 3100925 - 3101293 | 13524.2 |
| toxin | EYY08_16155 | Not Available | Positive | 3101383 - 3101757 | 14005.8 |
| hypothetical protein | EYY08_16160 | Not Available | Positive | 3101754 - 3102242 | 18142.8 |
| duf957 domain-containing protein | EYY08_16165 | Not Available | Positive | 3102254 - 3102451 | 7470.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





