Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | EYY08_15735 | Not Available | Negative | 3040386 - 3040568 | 7146.51 |
| is3 family transposase | EYY08_15740 | Not Available | Positive | 3040728 - 3041941 | 46264.1 |
| efflux rnd transporter periplasmic adaptor subunit | EYY08_15750 | Not Available | Positive | 3043395 - 3044582 | 43426.5 |
| macb family efflux pump subunit | EYY08_15755 | Not Available | Positive | 3044579 - 3046519 | 70417.9 |
| efflux transporter outer membrane subunit | EYY08_15760 | Not Available | Positive | 3046523 - 3047893 | 51583.3 |
| hypothetical protein | EYY08_15770 | Not Available | Negative | 3048690 - 3049631 | 36197.2 |
| hypothetical protein | EYY08_15775 | Not Available | Negative | 3049641 - 3049829 | 7073.42 |
| cobalamin biosynthesis protein cobw | EYY08_15790 | Not Available | Negative | 3051892 - 3053085 | 44768.0 |
| hypothetical protein | EYY08_15795 | Not Available | Negative | 3053500 - 3053724 | 8506.17 |
| is3 family transposase | EYY08_15800 | Not Available | Negative | 3054309 - 3054483 | 6541.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





