Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1 family transposase | EYY08_15665 | Not Available | Positive | 3030956 - 3031033 | 2943.51 |
| repb family plasmid replication initiator protein | EYY08_15690 | Not Available | Positive | 3032962 - 3033939 | 37317.0 |
| site-specific recombinase | EYY08_15695 | Not Available | Negative | 3034224 - 3034964 | 28192.5 |
| serine/threonine protein kinase | EYY08_15700 | Not Available | Negative | 3035085 - 3035273 | 7294.7 |
| antimicrobial resistance protein mig-14 | EYY08_15705 | Not Available | Negative | 3035647 - 3036555 | 35303.9 |
| nad-dependent epimerase/dehydratase family protein | EYY08_15710 | Not Available | Negative | 3036618 - 3037727 | 41024.3 |
| hypothetical protein | EYY08_15715 | Not Available | Positive | 3037786 - 3038070 | 11023.8 |
| omptin family outer membrane protease | EYY08_15720 | Not Available | Negative | 3038160 - 3039113 | 35635.3 |
| outer membrane protease | EYY08_15725 | Not Available | Positive | 3039217 - 3039606 | 14300.2 |
| hypothetical protein | EYY08_15730 | Not Available | Negative | 3039973 - 3040236 | 10185.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





