Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Broiler parent88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1299855 bp
Thymine Count
1303429 bp
Guanine Count
1344603 bp
Cytosine Count
1322967 bp
Genome Length
5271010 bp
Protein-coding Genes
4799 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1425 domain-containing protein | EYY08_15450 | Not Available | Positive | 2980952 - 2981329 | 13891.8 |
| penicillin-binding protein activator lpob | EYY08_15455 | Not Available | Positive | 2981343 - 2981984 | 22506.9 |
| thiamine kinase | EYY08_15460 | Not Available | Positive | 2981965 - 2982789 | 32540.2 |
| beta-n-acetylhexosaminidase | EYY08_15465 | Not Available | Positive | 2982800 - 2983825 | 37619.0 |
| alpha/beta hydrolase | EYY08_15470 | Not Available | Positive | 2983848 - 2984390 | 21227.4 |
| nad(p)/fad-dependent oxidoreductase | EYY08_15475 | Not Available | Positive | 2984721 - 2986025 | 47334.6 |
| glycine zipper 2tm domain-containing protein | EYY08_15480 | Not Available | Positive | 2986252 - 2986791 | 18935.7 |
| tetr family copper-responsive transcriptional repressor comr | EYY08_15485 | Not Available | Negative | 2986853 - 2987485 | 23480.1 |
| multiple stress resistance protein bhsa | EYY08_15490 | Not Available | Positive | 2987726 - 2987983 | 8815.55 |
| l,d-transpeptidase ldtc | EYY08_15495 | Not Available | Negative | 2988066 - 2989025 | 34490.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





